Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
L
|
M
|
N
|
P
|
Q
|
R
|
S
|
T
|
U
|
V
A
accession_number (heudiconv.utils.SeqInfo attribute)
add_rows_to_scans_keys_file() (in module heudiconv.bids)
add_taskname_to_infofile() (in module heudiconv.convert)
anonymize_sid() (in module heudiconv.utils)
assure_no_file_exists() (in module heudiconv.utils)
B
BIDSError
BIDSFile (class in heudiconv.bids)
bvals_are_zero() (in module heudiconv.convert)
C
clean_args() (in module heudiconv.queue)
clear_temp_dicoms() (in module heudiconv.utils)
compress_dicoms() (in module heudiconv.dicoms)
convert() (in module heudiconv.convert)
convert_dicom() (in module heudiconv.convert)
convert_sid_bids() (in module heudiconv.bids)
create_file_if_missing() (in module heudiconv.utils)
create_seqinfo() (in module heudiconv.dicoms)
create_tree() (in module heudiconv.utils)
custom (heudiconv.utils.SeqInfo attribute)
CustomSeqinfoT (class in heudiconv.dicoms)
D
date (heudiconv.utils.SeqInfo attribute)
dcm_dir_name (heudiconv.utils.SeqInfo attribute)
dim1 (heudiconv.utils.SeqInfo attribute)
dim2 (heudiconv.utils.SeqInfo attribute)
dim3 (heudiconv.utils.SeqInfo attribute)
dim4 (heudiconv.utils.SeqInfo attribute)
docstring_parameter() (in module heudiconv.utils)
E
embed_dicom_and_nifti_metadata() (in module heudiconv.dicoms)
embed_metadata_from_dicoms() (in module heudiconv.dicoms)
example_dcm_file (heudiconv.utils.SeqInfo attribute)
F
File (class in heudiconv.utils)
file_studyUID (heudiconv.dicoms.SeriesID attribute)
find_compatible_fmaps_for_run() (in module heudiconv.bids)
find_compatible_fmaps_for_session() (in module heudiconv.bids)
find_files() (in module heudiconv.parser)
find_fmap_groups() (in module heudiconv.bids)
find_subj_ses() (in module heudiconv.bids)
G
get_datetime() (in module heudiconv.utils)
get_datetime_from_dcm() (in module heudiconv.dicoms)
get_extracted_dicoms() (in module heudiconv.parser)
get_formatted_scans_key_row() (in module heudiconv.bids)
get_key_info_for_fmap_assignment() (in module heudiconv.bids)
get_known_heuristic_names() (in module heudiconv.utils)
get_reproducible_int() (in module heudiconv.dicoms)
get_shim_setting() (in module heudiconv.bids)
get_study_sessions() (in module heudiconv.parser)
get_typed_attr() (in module heudiconv.utils)
group_dicoms_into_seqinfos() (in module heudiconv.dicoms)
H
heudiconv.bids
module
heudiconv.convert
module
heudiconv.dicoms
module
heudiconv.parser
module
heudiconv.queue
module
heudiconv.utils
module
HEUDICONV_VERSION_JSON_KEY (in module heudiconv.bids)
I
image_type (heudiconv.utils.SeqInfo attribute)
is_derived (heudiconv.utils.SeqInfo attribute)
is_motion_corrected (heudiconv.utils.SeqInfo attribute)
is_readonly() (in module heudiconv.utils)
J
json_dumps() (in module heudiconv.utils)
json_dumps_pretty() (in module heudiconv.utils)
L
load_heuristic() (in module heudiconv.utils)
load_json() (in module heudiconv.utils)
locator (heudiconv.utils.StudySessionInfo attribute)
M
maybe_na() (in module heudiconv.bids)
module
heudiconv.bids
heudiconv.convert
heudiconv.dicoms
heudiconv.parser
heudiconv.queue
heudiconv.utils
N
nipype_convert() (in module heudiconv.convert)
P
parse() (heudiconv.bids.BIDSFile class method)
parse_private_csa_header() (in module heudiconv.dicoms)
patient_age (heudiconv.utils.SeqInfo attribute)
patient_id (heudiconv.utils.SeqInfo attribute)
patient_sex (heudiconv.utils.SeqInfo attribute)
populate_aggregated_jsons() (in module heudiconv.bids)
populate_bids_templates() (in module heudiconv.bids)
populate_intended_for() (in module heudiconv.bids)
protocol_name (heudiconv.dicoms.SeriesID attribute)
(heudiconv.utils.SeqInfo attribute)
Q
queue_conversion() (in module heudiconv.queue)
R
referring_physician_name (heudiconv.utils.SeqInfo attribute)
remove_prefix() (in module heudiconv.utils)
remove_suffix() (in module heudiconv.utils)
S
safe_copyfile() (in module heudiconv.utils)
safe_movefile() (in module heudiconv.utils)
sanitize_label() (in module heudiconv.bids)
save_converted_files() (in module heudiconv.convert)
save_json() (in module heudiconv.utils)
save_scans_key() (in module heudiconv.bids)
select_fmap_from_compatible_groups() (in module heudiconv.bids)
SeqInfo (class in heudiconv.utils)
sequence_name (heudiconv.utils.SeqInfo attribute)
series_description (heudiconv.utils.SeqInfo attribute)
series_files (heudiconv.utils.SeqInfo attribute)
series_id (heudiconv.utils.SeqInfo attribute)
series_number (heudiconv.dicoms.SeriesID attribute)
series_uid (heudiconv.utils.SeqInfo attribute)
SeriesID (class in heudiconv.dicoms)
session (heudiconv.utils.StudySessionInfo attribute)
set_readonly() (in module heudiconv.utils)
slim_down_info() (in module heudiconv.utils)
strptime_micr() (in module heudiconv.utils)
study_description (heudiconv.utils.SeqInfo attribute)
StudySessionInfo (class in heudiconv.utils)
subject (heudiconv.utils.StudySessionInfo attribute)
T
TE (heudiconv.utils.SeqInfo attribute)
TempDirs (class in heudiconv.utils)
time (heudiconv.utils.SeqInfo attribute)
total_files_till_now (heudiconv.utils.SeqInfo attribute)
TR (heudiconv.utils.SeqInfo attribute)
treat_age() (in module heudiconv.bids)
treat_infofile() (in module heudiconv.utils)
tuneup_bids_json_files() (in module heudiconv.bids)
U
unspecified (heudiconv.utils.SeqInfo attribute)
update_complex_name() (in module heudiconv.convert)
update_json() (in module heudiconv.utils)
update_multiecho_name() (in module heudiconv.convert)
update_uncombined_name() (in module heudiconv.convert)
V
validate_dicom() (in module heudiconv.dicoms)
heudiconv
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